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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs679526 chr11:77597794 G/C INTS4L1 chr7:64601603-64694600:+ 0.44 7.89 2.08E-14 Box Plot
THCA rs67956897 chr11:49477372 ATTCTT/A FOLH1B chr11:89372395-89431886:+ -0.35 -6.24 9.4E-10 Box Plot
THCA rs6795856 chr3:125773218 C/T ROPN1 chr3:123687368-123711025:- 0.33 5.92 6.25E-9 Box Plot
THCA rs67963117 chr8:9281755 G/A SGK223 chr8:8175258-8244008:- 0.36 6.04 3.17E-9 Box Plot
THCA rs67963654 chr14:39851812 T/C LOC647288 chr13:75811890-75814517:- -0.52 -9.65 2.96E-20 Box Plot
THCA rs6797318 chr3:88318346 G/A MANEAL chr1:38259474-38266809:+ 0.32 5.89 7.11E-9 Box Plot
THCA rs67981811 chr6:28354835 C/G BTN3A2 chr6:26365387-26378548:+ -0.8 -11.24 3.72E-26 Box Plot
THCA rs67981811 chr6:28354835 C/G RNF5P1 chr8:38458179-38458718:- 0.69 6.01 3.74E-9 Box Plot
THCA rs67981811 chr6:28354835 C/G ZFP57 chr6:29640169-29648887:- 0.94 8.97 6.53E-18 Box Plot
THCA rs67988745 chr1:111149619 G/A DLD chr7:107531415-107572175:+ -0.28 -6.04 3.06E-9 Box Plot
THCA rs6799100 chr3:125773885 G/C ROPN1 chr3:123687368-123711025:- 0.33 5.92 6.25E-9 Box Plot
THCA rs67998226 chr6:28238059 T/C BTN3A2 chr6:26365387-26378548:+ -0.81 -11.55 2.1E-27 Box Plot
THCA rs67998226 chr6:28238059 T/C RNF5P1 chr8:38458179-38458718:- 0.73 6.5 2.01E-10 Box Plot
THCA rs67998226 chr6:28238059 T/C ZFP57 chr6:29640169-29648887:- 0.89 8.58 1.35E-16 Box Plot
THCA rs68000518 chr2:132191925 G/C CCDC74B chr2:130896860-130902707:- 0.36 6.55 1.51E-10 Box Plot